U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    B1U08_gp1 polyprotein [ Enterovirus AN12 ]

    Gene ID: 30999491, updated on 7-May-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    B1U08_gp1
    Gene description
    polyprotein
    Locus tag
    B1U08_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Enterovirus AN12 (strain: AN12, nat-host: Bos taurus)
    Lineage
    Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Picornaviridae; Ensavirinae; Enterovirus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_033695.1 (822..7343)

    NC_033695.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_033695.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification of a novel bovine enterovirus possessing highly divergent amino acid sequences in capsid protein. Tsuchiaka S, et al. BMC Microbiol, 2017 Jan 17. PMID 28095784, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    polyprotein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_033695.1 Reference assembly

      Range
      822..7343
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009344963.1 polyprotein [Enterovirus AN12]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1Q2U236
      Conserved Domains (9) summary
      cd00205
      Location:622 → 805
      rhv_like; Picornavirus capsid protein domain_like. Picornaviruses are non-enveloped plus-strand ssRNA animal viruses with icosahedral capsids composed of 60 copies each of 4 virus encoded proteins; alignment includes picornaviridae, like poliovirus, hepatitis A ...
      pfam00073
      Location:93 → 285
      Rhv; picornavirus capsid protein
      pfam00548
      Location:1530 → 1695
      Peptidase_C3; 3C cysteine protease (picornain 3C)
      pfam00910
      Location:1213 → 1311
      RNA_helicase; RNA helicase
      pfam00947
      Location:858 → 984
      Pico_P2A; Picornavirus core protein 2A
      pfam01552
      Location:989 → 1089
      Pico_P2B; Picornavirus 2B protein
      cl02808
      Location:1729 → 2171
      RT_like; Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group ...
      pfam02226
      Location:2 → 69
      Pico_P1A; Picornavirus coat protein (VP4)
      pfam08727
      Location:1418 → 1478
      P3A; Poliovirus 3A protein like
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases