U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yddK leucine-rich repeat domain-containing protein YddK [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947312, updated on 4-Feb-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    yddK
    Gene description
    leucine-rich repeat domain-containing protein YddK
    Primary source
    ASAP:ABE-0004906
    Locus tag
    b1471
    See related
    ECOCYC:G6772
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1465
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (1544758..1545714, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene nitrate/nitrite transporter NarU Neighboring gene pseudo Neighboring gene putative uncharacterized protein YddL Neighboring gene amino acid exporter YddG

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The datA locus predominantly contributes to the initiator titration mechanism in the control of replication initiation in Escherichia coli. Ogawa T, et al. Mol Microbiol, 2002 Jun. PMID 12068813
    2. Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. Winterberg KM, et al. Appl Environ Microbiol, 2005 Jan. PMID 15640221, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    leucine-rich repeat domain-containing protein YddK

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1544758..1545714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009518781.1 leucine-rich repeat domain-containing protein YddK [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A369FJ55
      Conserved Domains (2) summary
      COG4886
      Location:93 → 318
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:110 → 130
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.