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yddK leucine-rich repeat domain-containing protein YddK [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 947312, updated on 4-Feb-2024

Summary

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Gene symbol
yddK
Gene description
leucine-rich repeat domain-containing protein YddK
Primary source
ASAP:ABE-0004906
Locus tag
b1471
See related
ECOCYC:G6772
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1465
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Genomic context

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Sequence:
NC_000913.3 (1544758..1545714, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene nitrate/nitrite transporter NarU Neighboring gene pseudo Neighboring gene putative uncharacterized protein YddL Neighboring gene amino acid exporter YddG

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The datA locus predominantly contributes to the initiator titration mechanism in the control of replication initiation in Escherichia coli. Ogawa T, et al. Mol Microbiol, 2002 Jun. PMID 12068813
  2. Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. Winterberg KM, et al. Appl Environ Microbiol, 2005 Jan. PMID 15640221, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
leucine-rich repeat domain-containing protein YddK

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1544758..1545714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009518781.1 leucine-rich repeat domain-containing protein YddK [Escherichia coli str. K-12 substr. MG1655]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A369FJ55
    Conserved Domains (2) summary
    COG4886
    Location:93 → 318
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:110 → 130
    LRR_RI; leucine-rich repeat [structural motif]
Nucleotide Protein
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