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Gm39866 predicted gene, 39866 [ Mus musculus (house mouse) ]

Gene ID: 105244218, updated on 8-Feb-2024

Summary

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Official Symbol
Gm39866provided by MGI
Official Full Name
predicted gene, 39866provided by MGI
Primary source
MGI:MGI:5622751
See related
AllianceGenome:MGI:5622751
Gene type
ncRNA
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm39866 in Genome Data Viewer
Location:
2 C3; 2
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (79061020..79088363, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (79230985..79235188, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1591 Neighboring gene STARR-seq mESC enhancer starr_04927 Neighboring gene STARR-positive B cell enhancer ABC_E4472 Neighboring gene STARR-positive B cell enhancer ABC_E10121 Neighboring gene predicted gene, 35748 Neighboring gene heat shock protein 1 (chaperonin) pseudogene 14 Neighboring gene STARR-positive B cell enhancer mm9_chr2:79068188-79068489 Neighboring gene STARR-seq mESC enhancer starr_04928 Neighboring gene predicted gene, 35813 Neighboring gene STARR-positive B cell enhancer ABC_E7829 Neighboring gene STARR-positive B cell enhancer ABC_E5938 Neighboring gene STARR-seq mESC enhancer starr_04929 Neighboring gene STARR-positive B cell enhancer mm9_chr2:79105774-79106074 Neighboring gene STARR-seq mESC enhancer starr_04930 Neighboring gene integrin alpha 4 Neighboring gene STARR-seq mESC enhancer starr_04931 Neighboring gene STARR-seq mESC enhancer starr_04932 Neighboring gene STARR-seq mESC enhancer starr_04933 Neighboring gene ceramide kinase-like Neighboring gene predicted gene, 22606 Neighboring gene tubulin, beta 6 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    79061020..79088363 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_004941131.1 RNA Sequence

  2. XR_004941132.1 RNA Sequence

  3. XR_866506.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Research Materials