nsv959687
- Organism: Homo sapiens
- Study:nstd86 (Poultney et al. 2013)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:371,758
- Publication(s):Poultney et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1065 SVs from 92 studies. See in: genome view
Overlapping variant regions from other studies: 1065 SVs from 92 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv959687 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 89,107,747 | 89,479,504 |
| nsv959687 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 89,156,897 | 89,528,654 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3020959 | duplication | Sequencing | Read depth |
| nssv3021819 | duplication | Sequencing | Read depth |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv3020959 | Remapped | Pass | NC_000003.12:g.(88 156637_88156637)_( 93874243_93874243) dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 88,156,637 | 88,156,637 | 93,874,243 | 93,874,243 |
| nssv3021819 | Remapped | Perfect | NC_000003.12:g.(89 107838_89127207)_( 89413268_89419203) dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 89,107,838 | 89,127,207 | 89,413,268 | 89,419,203 |
| nssv3020959 | Submitted genomic | NC_000003.11:g.(88 205787_89156897)_( 89528654_93593087) dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 88,205,787 | 89,156,897 | 89,528,654 | 93,593,087 | ||
| nssv3021819 | Submitted genomic | NC_000003.11:g.(89 156988_89176357)_( 89462418_89468353) dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 89,156,988 | 89,176,357 | 89,462,418 | 89,468,353 |