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dbVar

Database of genomic structural variation

nsv9492

Organism: Homo sapiens

Study:nstd4 (Perry et al. 2008)
Variant Type:copy number variation
Method Type:Oligo aCGH
Submitted on:NCBI35 (hg17)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:59,850

Publication(s):Perry et al. 2008

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 66 SVs from 18 studies. See in: genome view

Remapped(Score: Perfect):11,134,540-11,194,389

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
nsv9492	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	11,134,540	11,194,389
nsv9492	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000017.10	Chr17	11,037,857	11,097,706
nsv9492	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000017.9	Chr17	10,978,582	11,038,431

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv28167	copy number loss	NA19221	Oligo aCGH	Probe signal intensity	857

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv28167	Remapped	Perfect	NC_000017.11:g.(11 134540_11135515)_( 11137783_11194389) del	GRCh38.p12	First Pass	NC_000017.11	Chr17	11,134,540	11,135,515	11,137,783	11,194,389
nssv28167	Remapped	Perfect	NC_000017.10:g.(11 037857_11038832)_( 11041100_11097706) del	GRCh37.p13	First Pass	NC_000017.10	Chr17	11,037,857	11,038,832	11,041,100	11,097,706
nssv28167	Submitted genomic		NC_000017.9:g.(109 78582_10979557)_(1 0981825_11038431)d el	NCBI35 (hg17)		NC_000017.9	Chr17	10,978,582	10,979,557	10,981,825	11,038,431

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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