nsv932800
- Organism: Homo sapiens
- Study:nstd79 (Dittwald et al. 2013)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:3,079,784
- Publication(s):Dittwald et al. 2013
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 7648 SVs from 117 studies. See in: genome view
Overlapping variant regions from other studies: 7811 SVs from 117 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv932800 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 82,195,389 | 82,195,389 | 85,275,172 | 85,275,172 |
| nsv932800 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 82,487,730 | 83,213,987 | 85,726,193 | 85,818,403 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv1612252 | deletion | 795 | Oligo aCGH | Probe signal intensity |
| nssv1610627 | deletion | 492 | Oligo aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1612252 | Remapped | Pass | NC_000015.10:g.(82 274346_82274346)_( 85290841_85290841) del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 82,274,346 | 82,274,346 | 85,290,841 | 85,290,841 |
| nssv1610627 | Remapped | Pass | NC_000015.10:g.(82 274346_82274346)_( 85350296_85350296) del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 82,274,346 | 82,274,346 | 85,350,296 | 85,350,296 |
| nssv1612252 | Remapped | Good | NC_000015.9:g.(825 66687_82566687)_(8 5834072_85834072)d el | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 82,566,687 | 82,566,687 | 85,834,072 | 85,834,072 |
| nssv1610627 | Remapped | Good | NC_000015.9:g.(825 66687_82566687)_(8 5893527_85893527)d el | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 82,566,687 | 82,566,687 | 85,893,527 | 85,893,527 |
| nssv1610627 | Submitted genomic | NC_000015.8:g.(803 53742_81018394)_(8 3451404_83694531)d el | NCBI36 (hg18) | NC_000015.8 | Chr15 | 80,353,742 | 81,018,394 | 83,451,404 | 83,694,531 | ||
| nssv1612252 | Submitted genomic | NC_000015.8:g.(803 53742_81018394)_(8 3451404_83635076)d el | NCBI36 (hg18) | NC_000015.8 | Chr15 | 80,353,742 | 81,018,394 | 83,451,404 | 83,635,076 |