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nsv878197

  • Variant Calls:3
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:147,111

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 765 SVs from 83 studies. See in: genome view    
Remapped(Score: Perfect):197,111,615-197,258,725Question Mark
Overlapping variant regions from other studies: 765 SVs from 83 studies. See in: genome view    
Remapped(Score: Perfect):196,838,486-196,985,596Question Mark
Overlapping variant regions from other studies: 372 SVs from 27 studies. See in: genome view    
Submitted genomic198,322,883-198,469,993Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nsv878197RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000003.12Chr3197,111,615197,138,371197,236,741197,258,725
nsv878197RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000003.11Chr3196,838,486196,865,242196,963,612196,985,596
nsv878197Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000003.10Chr3198,322,883198,349,639198,448,009198,469,993

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv1564018copy number lossIS30146SNP arraySNP genotyping analysis19
nssv1581707copy number lossIS35701SNP arraySNP genotyping analysis38
nssv1585449copy number gainIS37458SNP arraySNP genotyping analysis13

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrOuter StartInner StartInner StopOuter Stop
nssv1564018RemappedPerfectNC_000003.12:g.(19
7111615_197138371)
_(197236741_197258
725)del
GRCh38.p12First PassNC_000003.12Chr3197,111,615197,138,371197,236,741197,258,725
nssv1581707RemappedPerfectNC_000003.12:g.(19
7111615_197138371)
_(197236741_197258
725)del
GRCh38.p12First PassNC_000003.12Chr3197,111,615197,138,371197,236,741197,258,725
nssv1585449RemappedPerfectNC_000003.12:g.(19
7111615_197138371)
_(197236741_197258
725)dup
GRCh38.p12First PassNC_000003.12Chr3197,111,615197,138,371197,236,741197,258,725
nssv1564018RemappedPerfectNC_000003.11:g.(19
6838486_196865242)
_(196963612_196985
596)del
GRCh37.p13First PassNC_000003.11Chr3196,838,486196,865,242196,963,612196,985,596
nssv1581707RemappedPerfectNC_000003.11:g.(19
6838486_196865242)
_(196963612_196985
596)del
GRCh37.p13First PassNC_000003.11Chr3196,838,486196,865,242196,963,612196,985,596
nssv1585449RemappedPerfectNC_000003.11:g.(19
6838486_196865242)
_(196963612_196985
596)dup
GRCh37.p13First PassNC_000003.11Chr3196,838,486196,865,242196,963,612196,985,596
nssv1564018Submitted genomicNC_000003.10:g.(19
8322883_198349639)
_(198448009_198469
993)del
NCBI36 (hg18)NC_000003.10Chr3198,322,883198,349,639198,448,009198,469,993
nssv1581707Submitted genomicNC_000003.10:g.(19
8322883_198349639)
_(198448009_198469
993)del
NCBI36 (hg18)NC_000003.10Chr3198,322,883198,349,639198,448,009198,469,993
nssv1585449Submitted genomicNC_000003.10:g.(19
8322883_198349639)
_(198448009_198469
993)dup
NCBI36 (hg18)NC_000003.10Chr3198,322,883198,349,639198,448,009198,469,993

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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