nsv869830
- Organism: Homo sapiens
- Study:nstd53 (Tuttelmann et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:207,576
- Publication(s):Tüttelmann et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1619 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 1619 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 381 SVs from 28 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv869830 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 111,177,688 | 111,181,700 | 111,379,755 | 111,385,263 |
| nsv869830 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 110,817,744 | 110,821,756 | 111,019,811 | 111,025,319 |
| nsv869830 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 110,604,980 | 110,608,992 | 110,807,047 | 110,812,555 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1496784 | copy number loss | OAT_78 | Oligo aCGH | Probe signal intensity | 7 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1496784 | Remapped | Perfect | NC_000007.14:g.(11 1177688_111181700) _(111379755_111385 263)del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 111,177,688 | 111,181,700 | 111,379,755 | 111,385,263 |
| nssv1496784 | Remapped | Perfect | NC_000007.13:g.(11 0817744_110821756) _(111019811_111025 319)del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 110,817,744 | 110,821,756 | 111,019,811 | 111,025,319 |
| nssv1496784 | Submitted genomic | NC_000007.12:g.(11 0604980_110608992) _(110807047_110812 555)del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 110,604,980 | 110,608,992 | 110,807,047 | 110,812,555 |