nsv869731
- Organism: Homo sapiens
- Study:nstd53 (Tuttelmann et al. 2011)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:10
- Validation:Not tested
- Clinical Assertions: No
- Region Size:182,856
- Publication(s):Tüttelmann et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1376 SVs from 94 studies. See in: genome view
Overlapping variant regions from other studies: 1376 SVs from 94 studies. See in: genome view
Overlapping variant regions from other studies: 495 SVs from 23 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv869731 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nsv869731 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nsv869731 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1495945 | copy number loss | OAT_30 | Oligo aCGH | Probe signal intensity | 12 |
| nssv1496088 | copy number loss | OAT_74 | Oligo aCGH | Probe signal intensity | 19 |
| nssv1496145 | copy number loss | CONTROL_25 | Oligo aCGH | Probe signal intensity | 14 |
| nssv1496756 | copy number loss | OAT_42 | Oligo aCGH | Probe signal intensity | 11 |
| nssv1496978 | copy number loss | SCOS_33 | Oligo aCGH | Probe signal intensity | 22 |
| nssv1497928 | copy number loss | CONTROL_99 | Oligo aCGH | Probe signal intensity | 23 |
| nssv1498020 | copy number loss | OAT_47 | Oligo aCGH | Probe signal intensity | 13 |
| nssv1498206 | copy number loss | OAT_06 | Oligo aCGH | Probe signal intensity | 18 |
| nssv1498487 | copy number loss | CONTROL_19 | Oligo aCGH | Probe signal intensity | 12 |
| nssv1498744 | copy number loss | OAT_65 | Oligo aCGH | Probe signal intensity | 17 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv1495945 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1496088 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1496145 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1496756 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1496978 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1497928 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1498020 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1498206 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1498487 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1498744 | Remapped | Perfect | NC_000008.11:g.(13 6667427_136680993) _(136837942_136850 282)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,667,427 | 136,680,993 | 136,837,942 | 136,850,282 |
| nssv1495945 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1496088 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1496145 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1496756 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1496978 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1497928 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1498020 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1498206 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1498487 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1498744 | Remapped | Perfect | NC_000008.10:g.(13 7679670_137693236) _(137850185_137862 525)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,679,670 | 137,693,236 | 137,850,185 | 137,862,525 |
| nssv1495945 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 | ||
| nssv1496088 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 | ||
| nssv1496145 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 | ||
| nssv1496756 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 | ||
| nssv1496978 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 | ||
| nssv1497928 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 | ||
| nssv1498020 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 | ||
| nssv1498206 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 | ||
| nssv1498487 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 | ||
| nssv1498744 | Submitted genomic | NC_000008.9:g.(137 748852_137762418)_ (137919367_1379317 07)del | NCBI36 (hg18) | NC_000008.9 | Chr8 | 137,748,852 | 137,762,418 | 137,919,367 | 137,931,707 |