nsv833558
- Organism: Homo sapiens
- Study:nstd68 (Wong et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI35 (hg17)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:214,200
- Publication(s):Wong et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1071 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 974 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 111 SVs from 8 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv833558 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 79,237,201 | - | 79,451,400 |
| nsv833558 | Remapped | Pass | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 77,233,283 | 77,412,076 | - |
| nsv833558 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000017.9 | Chr17 | 74,744,878 | - | 74,959,077 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1453758 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1453759 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|
| nssv1453758 | Remapped | Perfect | NC_000017.11:g.(79 237201_?)_(?_79451 400)del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 79,237,201 | - | 79,451,400 |
| nssv1453759 | Remapped | Perfect | NC_000017.11:g.(79 237201_?)_(?_79451 400)del | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 79,237,201 | - | 79,451,400 |
| nssv1453758 | Remapped | Pass | NC_000017.10:g.(77 233283_?)_(7741207 6_?)del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 77,233,283 | 77,412,076 | - |
| nssv1453759 | Remapped | Pass | NC_000017.10:g.(77 233283_?)_(7741207 6_?)del | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 77,233,283 | 77,412,076 | - |
| nssv1453758 | Submitted genomic | NC_000017.9:g.(747 44878_?)_(?_749590 77)del | NCBI35 (hg17) | NC_000017.9 | Chr17 | 74,744,878 | - | 74,959,077 | ||
| nssv1453759 | Submitted genomic | NC_000017.9:g.(747 44878_?)_(?_749590 77)del | NCBI35 (hg17) | NC_000017.9 | Chr17 | 74,744,878 | - | 74,959,077 |