nsv830728
- Organism: Homo sapiens
- Study:nstd68 (Wong et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI35 (hg17)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:221,544
- Publication(s):Wong et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 596 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 596 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 44 SVs from 4 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv830728 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 91,854,661 | 92,076,204 |
| nsv830728 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 92,564,379 | 92,785,922 |
| nsv830728 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000006.9 | Chr6 | 92,621,100 | 92,842,643 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1445508 | copy number loss | BAC aCGH | Probe signal intensity |
| nssv1445509 | copy number loss | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1445508 | Remapped | Perfect | NC_000006.12:g.(91 854661_?)_(?_92076 204)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 91,854,661 | 92,076,204 |
| nssv1445509 | Remapped | Perfect | NC_000006.12:g.(91 854661_?)_(?_92076 204)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 91,854,661 | 92,076,204 |
| nssv1445508 | Remapped | Perfect | NC_000006.11:g.(92 564379_?)_(?_92785 922)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 92,564,379 | 92,785,922 |
| nssv1445509 | Remapped | Perfect | NC_000006.11:g.(92 564379_?)_(?_92785 922)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 92,564,379 | 92,785,922 |
| nssv1445508 | Submitted genomic | NC_000006.9:g.(926 21100_?)_(?_928426 43)del | NCBI35 (hg17) | NC_000006.9 | Chr6 | 92,621,100 | 92,842,643 | ||
| nssv1445509 | Submitted genomic | NC_000006.9:g.(926 21100_?)_(?_928426 43)del | NCBI35 (hg17) | NC_000006.9 | Chr6 | 92,621,100 | 92,842,643 |