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dbVar

Database of genomic structural variation

nsv821635

Organism: Homo sapiens

Study:nstd66 (Sebat et al. 2004)
Variant Type:copy number variation
Method Type:ROMA
Submitted on:NCBI35 (hg17)

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:285,235

Publication(s):Sebat et al. 2004

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1467 SVs from 98 studies. See in: genome view

Remapped(Score: Perfect):34,807,488-35,092,722

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv821635	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	34,807,488	35,092,722
nsv821635	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	34,809,110	35,094,344
nsv821635	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000004.9	Chr4	34,631,676	34,916,910

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv1421359	copy number loss	ROMA	Probe signal intensity
nssv1421360	copy number loss	ROMA	Probe signal intensity
nssv1421361	copy number loss	ROMA	Probe signal intensity
nssv1421362	copy number loss	ROMA	Probe signal intensity
nssv1421364	copy number loss	ROMA	Probe signal intensity
nssv1421365	copy number loss	ROMA	Probe signal intensity

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv1421359	Remapped	Perfect	NC_000004.12:g.(?_ 34807488)_(3509272 2_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	34,807,488	35,092,722
nssv1421360	Remapped	Perfect	NC_000004.12:g.(?_ 34807488)_(3509272 2_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	34,807,488	35,092,722
nssv1421361	Remapped	Perfect	NC_000004.12:g.(?_ 34807488)_(3509272 2_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	34,807,488	35,092,722
nssv1421362	Remapped	Perfect	NC_000004.12:g.(?_ 34807488)_(3509272 2_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	34,807,488	35,092,722
nssv1421364	Remapped	Perfect	NC_000004.12:g.(?_ 34807488)_(3509272 2_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	34,807,488	35,092,722
nssv1421365	Remapped	Perfect	NC_000004.12:g.(?_ 34807488)_(3509272 2_?)del	GRCh38.p12	First Pass	NC_000004.12	Chr4	34,807,488	35,092,722
nssv1421359	Remapped	Perfect	NC_000004.11:g.(?_ 34809110)_(3509434 4_?)del	GRCh37.p13	First Pass	NC_000004.11	Chr4	34,809,110	35,094,344
nssv1421360	Remapped	Perfect	NC_000004.11:g.(?_ 34809110)_(3509434 4_?)del	GRCh37.p13	First Pass	NC_000004.11	Chr4	34,809,110	35,094,344
nssv1421361	Remapped	Perfect	NC_000004.11:g.(?_ 34809110)_(3509434 4_?)del	GRCh37.p13	First Pass	NC_000004.11	Chr4	34,809,110	35,094,344
nssv1421362	Remapped	Perfect	NC_000004.11:g.(?_ 34809110)_(3509434 4_?)del	GRCh37.p13	First Pass	NC_000004.11	Chr4	34,809,110	35,094,344
nssv1421364	Remapped	Perfect	NC_000004.11:g.(?_ 34809110)_(3509434 4_?)del	GRCh37.p13	First Pass	NC_000004.11	Chr4	34,809,110	35,094,344
nssv1421365	Remapped	Perfect	NC_000004.11:g.(?_ 34809110)_(3509434 4_?)del	GRCh37.p13	First Pass	NC_000004.11	Chr4	34,809,110	35,094,344
nssv1421359	Submitted genomic		NC_000004.9:g.(?_3 4631676)_(34916910 _?)del	NCBI35 (hg17)		NC_000004.9	Chr4	34,631,676	34,916,910
nssv1421360	Submitted genomic		NC_000004.9:g.(?_3 4631676)_(34916910 _?)del	NCBI35 (hg17)		NC_000004.9	Chr4	34,631,676	34,916,910
nssv1421361	Submitted genomic		NC_000004.9:g.(?_3 4631676)_(34916910 _?)del	NCBI35 (hg17)		NC_000004.9	Chr4	34,631,676	34,916,910
nssv1421362	Submitted genomic		NC_000004.9:g.(?_3 4631676)_(34916910 _?)del	NCBI35 (hg17)		NC_000004.9	Chr4	34,631,676	34,916,910
nssv1421364	Submitted genomic		NC_000004.9:g.(?_3 4631676)_(34916910 _?)del	NCBI35 (hg17)		NC_000004.9	Chr4	34,631,676	34,916,910
nssv1421365	Submitted genomic		NC_000004.9:g.(?_3 4631676)_(34916910 _?)del	NCBI35 (hg17)		NC_000004.9	Chr4	34,631,676	34,916,910

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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