nsv820151
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:20,513
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 145 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 145 SVs from 35 studies. See in: genome view
Overlapping variant regions from other studies: 37 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv820151 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 92,985,117 | 93,005,629 |
| nsv820151 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 92,718,283 | 92,738,795 |
| nsv820151 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 92,357,931 | 92,378,443 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418685 | copy number loss | SAMN00002681 | Oligo aCGH | Probe signal intensity | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418685 | Remapped | Perfect | NC_000011.10:g.(?_ 92985117)_(9300562 9_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 92,985,117 | 93,005,629 |
| nssv1418685 | Remapped | Perfect | NC_000011.9:g.(?_9 2718283)_(92738795 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 92,718,283 | 92,738,795 |
| nssv1418685 | Submitted genomic | NC_000011.8:g.(?_9 2357931)_(92378443 _?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 92,357,931 | 92,378,443 |