nsv819876
- Organism: Homo sapiens
- Study:nstd43 (Kim et al. 2009)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:110
- Publication(s):Kim et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 228 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 228 SVs from 53 studies. See in: genome view
Overlapping variant regions from other studies: 98 SVs from 14 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv819876 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 131,477,656 | 131,477,765 |
| nsv819876 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000012.11 | Chr12 | 131,962,201 | 131,962,310 |
| nsv819876 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000012.10 | Chr12 | 130,528,154 | 130,528,263 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv1418896 | insertion | SAMN00002681 | Sequencing | Paired-end mapping | 1,333 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1418896 | Remapped | Perfect | NC_000012.12:g.(13 1477656_?)_(?_1314 77765)ins974 | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 131,477,656 | 131,477,765 |
| nssv1418896 | Remapped | Perfect | NC_000012.11:g.(13 1962201_?)_(?_1319 62310)ins974 | GRCh37.p13 | First Pass | NC_000012.11 | Chr12 | 131,962,201 | 131,962,310 |
| nssv1418896 | Submitted genomic | NC_000012.10:g.(13 0528154_?)_(?_1305 28263)ins974 | NCBI36 (hg18) | NC_000012.10 | Chr12 | 130,528,154 | 130,528,263 |