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dbVar

Database of genomic structural variation

nsv818667

Organism: Homo sapiens

Study:nstd64 (Wang et al. 2007)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:NCBI35 (hg17)

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:63,911

Publication(s):Wang et al. 2007

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 568 SVs from 71 studies. See in: genome view

Remapped(Score: Perfect):189,748,529-189,812,439

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv818667	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	189,748,529	189,812,439
nsv818667	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	189,717,659	189,781,569
nsv818667	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000001.8	Chr1	186,449,316	186,513,226

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv1416123	copy number loss	NA12892	SNP array	Probe signal intensity	30
nssv1416124	copy number loss	NA12878	SNP array	Probe signal intensity	28

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv1416123	Remapped	Perfect	NC_000001.11:g.(?_ 189748529)_(189812 439_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	189,748,529	189,812,439
nssv1416124	Remapped	Perfect	NC_000001.11:g.(?_ 189748529)_(189812 439_?)del	GRCh38.p12	First Pass	NC_000001.11	Chr1	189,748,529	189,812,439
nssv1416123	Remapped	Perfect	NC_000001.10:g.(?_ 189717659)_(189781 569_?)del	GRCh37.p13	First Pass	NC_000001.10	Chr1	189,717,659	189,781,569
nssv1416124	Remapped	Perfect	NC_000001.10:g.(?_ 189717659)_(189781 569_?)del	GRCh37.p13	First Pass	NC_000001.10	Chr1	189,717,659	189,781,569
nssv1416123	Submitted genomic		NC_000001.8:g.(?_1 86449316)_(1865132 26_?)del	NCBI35 (hg17)		NC_000001.8	Chr1	186,449,316	186,513,226
nssv1416124	Submitted genomic		NC_000001.8:g.(?_1 86449316)_(1865132 26_?)del	NCBI35 (hg17)		NC_000001.8	Chr1	186,449,316	186,513,226

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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