nsv818658
- Organism: Homo sapiens
- Study:nstd64 (Wang et al. 2007)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:5
- Validation:Not tested
- Clinical Assertions: No
- Region Size:163,701
- Publication(s):Wang et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1310 SVs from 93 studies. See in: genome view
Overlapping variant regions from other studies: 1310 SVs from 93 studies. See in: genome view
Overlapping variant regions from other studies: 216 SVs from 12 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv818658 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 136,675,712 | 136,839,412 |
nsv818658 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 137,687,955 | 137,851,655 |
nsv818658 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000008.9 | Chr8 | 137,757,137 | 137,920,837 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv1415671 | copy number loss | NA12249 | SNP array | Probe signal intensity | 20 |
nssv1415674 | copy number loss | NA10835 | SNP array | Probe signal intensity | 30 |
nssv1415770 | copy number loss | NA12874 | SNP array | Probe signal intensity | 16 |
nssv1416255 | copy number loss | NA12056 | SNP array | Probe signal intensity | 26 |
nssv1418010 | copy number loss | NA07357 | SNP array | Probe signal intensity | 30 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv1415671 | Remapped | Perfect | NC_000008.11:g.(?_ 136675712)_(136839 412_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,675,712 | 136,839,412 |
nssv1415674 | Remapped | Perfect | NC_000008.11:g.(?_ 136675712)_(136839 412_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,675,712 | 136,839,412 |
nssv1415770 | Remapped | Perfect | NC_000008.11:g.(?_ 136675712)_(136839 412_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,675,712 | 136,839,412 |
nssv1416255 | Remapped | Perfect | NC_000008.11:g.(?_ 136675712)_(136839 412_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,675,712 | 136,839,412 |
nssv1418010 | Remapped | Perfect | NC_000008.11:g.(?_ 136675712)_(136839 412_?)del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 136,675,712 | 136,839,412 |
nssv1415671 | Remapped | Perfect | NC_000008.10:g.(?_ 137687955)_(137851 655_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,687,955 | 137,851,655 |
nssv1415674 | Remapped | Perfect | NC_000008.10:g.(?_ 137687955)_(137851 655_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,687,955 | 137,851,655 |
nssv1415770 | Remapped | Perfect | NC_000008.10:g.(?_ 137687955)_(137851 655_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,687,955 | 137,851,655 |
nssv1416255 | Remapped | Perfect | NC_000008.10:g.(?_ 137687955)_(137851 655_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,687,955 | 137,851,655 |
nssv1418010 | Remapped | Perfect | NC_000008.10:g.(?_ 137687955)_(137851 655_?)del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 137,687,955 | 137,851,655 |
nssv1415671 | Submitted genomic | NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del | NCBI35 (hg17) | NC_000008.9 | Chr8 | 137,757,137 | 137,920,837 | ||
nssv1415674 | Submitted genomic | NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del | NCBI35 (hg17) | NC_000008.9 | Chr8 | 137,757,137 | 137,920,837 | ||
nssv1415770 | Submitted genomic | NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del | NCBI35 (hg17) | NC_000008.9 | Chr8 | 137,757,137 | 137,920,837 | ||
nssv1416255 | Submitted genomic | NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del | NCBI35 (hg17) | NC_000008.9 | Chr8 | 137,757,137 | 137,920,837 | ||
nssv1418010 | Submitted genomic | NC_000008.9:g.(?_1 37757137)_(1379208 37_?)del | NCBI35 (hg17) | NC_000008.9 | Chr8 | 137,757,137 | 137,920,837 |