nsv7407
- Organism: Homo sapiens
- Study:nstd2 (Kidd et al. 2008)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Yes
- Clinical Assertions: No
- Region Size:40,022
- Publication(s):Kidd et al. 2008
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 181 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 181 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 9 SVs from 4 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv7407 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 132,900,505 | 132,940,526 |
| nsv7407 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 132,585,265 | 132,625,286 |
| nsv7407 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000007.11 | Chr7 | 132,042,520 | 132,082,541 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3580 | Remapped | Perfect | NC_000007.14:g.(13 2900505_?)_(?_1329 40526)inv | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 132,900,505 | 132,940,526 |
| nssv3580 | Remapped | Perfect | NC_000007.13:g.(13 2585265_?)_(?_1326 25286)inv | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 132,585,265 | 132,625,286 |
| nssv3580 | Submitted genomic | NC_000007.11:g.(13 2042520_?)_(?_1320 82541)inv | NCBI35 (hg17) | NC_000007.11 | Chr7 | 132,042,520 | 132,082,541 |
Validation Information
| Variant Call ID | Experiment ID | Sample ID | Method | Analysis | Result |
|---|---|---|---|---|---|
| nssv3580 | 3 | NA12878 | Multiple complete digestion | MCD analysis | Pass |