nsv7098704

Organism: Homo sapiens

Study:nstd230 (Sugimoto et al. 2023)
Variant Type:complex chromosomal rearrangement
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:5
Validation:Not tested
Clinical Assertions: No
Region Size:1

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 132 SVs from 27 studies. See in: genome view

Remapped(Score: Perfect):27,729,338-27,729,338

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	27,729,338	27,729,338	+
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	27,729,342	27,729,342	-
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	2,891,470	2,891,470	+
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000005.10	Chr5	2,891,476	2,891,476	-
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	117,515,480	117,515,480	+
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000007.14	Chr7	117,515,481	117,515,481	-
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	111,576,612	111,576,612	+
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	111,577,195	111,577,195	-
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	111,924,324	111,924,324	+
nsv7098704	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	111,924,549	111,924,549	-
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	27,729,445	27,729,445	+
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	27,729,449	27,729,449	-
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	2,891,584	2,891,584	+
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000005.9	Chr5	2,891,590	2,891,590	-
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	117,155,534	117,155,534	+
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000007.13	Chr7	117,155,535	117,155,535	-
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	111,447,337	111,447,337	+
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	111,447,920	111,447,920	-
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	111,795,048	111,795,048	+
nsv7098704	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	111,795,273	111,795,273	-

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18792361	intrachromosomal translocation	FHU15-147	Sequencing	Sequence alignment	5
nssv18792363	interchromosomal translocation	FHU15-147	Sequencing	Sequence alignment	5
nssv18792364	interchromosomal translocation	FHU15-147	Sequencing	Sequence alignment	5
nssv18792362	interchromosomal translocation	FHU15-147	Sequencing	Sequence alignment	5
nssv18792365	interchromosomal translocation	FHU15-147	Sequencing	Sequence alignment	5

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop	strand
nssv18792361	Remapped	Perfect	GRCh38.p12	First Pass	NC_000005.10	Chr5	2,891,470	2,891,470	+
nssv18792363	Remapped	Perfect	GRCh38.p12	First Pass	NC_000005.10	Chr5	2,891,476	2,891,476	-
nssv18792364	Remapped	Perfect	GRCh38.p12	First Pass	NC_000005.10	Chr5	27,729,338	27,729,338	+
nssv18792361	Remapped	Perfect	GRCh38.p12	First Pass	NC_000005.10	Chr5	27,729,342	27,729,342	-
nssv18792362	Remapped	Perfect	GRCh38.p12	First Pass	NC_000007.14	Chr7	117,515,480	117,515,480	+
nssv18792365	Remapped	Perfect	GRCh38.p12	First Pass	NC_000007.14	Chr7	117,515,481	117,515,481	-
nssv18792363	Remapped	Perfect	GRCh38.p12	First Pass	NC_000011.10	Chr11	111,576,612	111,576,612	+
nssv18792365	Remapped	Perfect	GRCh38.p12	First Pass	NC_000011.10	Chr11	111,577,195	111,577,195	-
nssv18792364	Remapped	Perfect	GRCh38.p12	First Pass	NC_000011.10	Chr11	111,924,324	111,924,324	+
nssv18792362	Remapped	Perfect	GRCh38.p12	First Pass	NC_000011.10	Chr11	111,924,549	111,924,549	-
nssv18792361	Submitted genomic		GRCh37 (hg19)		NC_000005.9	Chr5	2,891,584	2,891,584	+
nssv18792363	Submitted genomic		GRCh37 (hg19)		NC_000005.9	Chr5	2,891,590	2,891,590	-
nssv18792364	Submitted genomic		GRCh37 (hg19)		NC_000005.9	Chr5	27,729,445	27,729,445	+
nssv18792361	Submitted genomic		GRCh37 (hg19)		NC_000005.9	Chr5	27,729,449	27,729,449	-
nssv18792362	Submitted genomic		GRCh37 (hg19)		NC_000007.13	Chr7	117,155,534	117,155,534	+
nssv18792365	Submitted genomic		GRCh37 (hg19)		NC_000007.13	Chr7	117,155,535	117,155,535	-
nssv18792363	Submitted genomic		GRCh37 (hg19)		NC_000011.9	Chr11	111,447,337	111,447,337	+
nssv18792365	Submitted genomic		GRCh37 (hg19)		NC_000011.9	Chr11	111,447,920	111,447,920	-
nssv18792364	Submitted genomic		GRCh37 (hg19)		NC_000011.9	Chr11	111,795,048	111,795,048	+
nssv18792362	Submitted genomic		GRCh37 (hg19)		NC_000011.9	Chr11	111,795,273	111,795,273	-

dbVar

Database of genomic structural variation

nsv7098704

Links to Other Resources

Genome View

Variant Region Placement Information

Variant Call Information

Variant Call Placement Information

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant