nsv7098701
- Organism: Homo sapiens
- Study:nstd230 (Sugimoto et al. 2023)
- Variant Type:complex chromosomal rearrangement
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:10
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 188 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 188 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 170 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 170 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 176 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 176 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 180 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 180 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 186 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 186 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 154 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 154 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 144 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 144 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 12 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 12 studies. See in: genome view
Overlapping variant regions from other studies: 148 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 148 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 188 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 188 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 170 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 170 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 176 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 176 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 180 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 180 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 186 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 186 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 154 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 154 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 144 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 144 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 12 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 12 studies. See in: genome view
Overlapping variant regions from other studies: 149 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 149 SVs from 28 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 113,327,375 | 113,327,375 | + |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 113,327,377 | 113,327,377 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 113,518,619 | 113,518,619 | + |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 113,518,620 | 113,518,620 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 113,788,286 | 113,788,286 | + |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 113,788,286 | 113,788,286 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 113,914,806 | 113,914,806 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 113,914,807 | 113,914,807 | + |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 114,094,222 | 114,094,222 | + |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 114,094,222 | 114,094,222 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 121,597,201 | 121,597,201 | + |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 121,597,201 | 121,597,201 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 78,799,545 | 78,799,545 | + |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 78,799,545 | 78,799,545 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 81,854,080 | 81,854,080 | + |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 81,854,080 | 81,854,080 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 14,301,475 | 14,301,475 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 14,301,476 | 14,301,476 | + |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 16,399,832 | 16,399,832 | - |
nsv7098701 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 16,399,833 | 16,399,833 | + |
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 114,339,604 | 114,339,604 | + | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 114,339,606 | 114,339,606 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 114,530,848 | 114,530,848 | + | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 114,530,849 | 114,530,849 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 114,800,515 | 114,800,515 | + | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 114,800,515 | 114,800,515 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 114,927,035 | 114,927,035 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 114,927,036 | 114,927,036 | + | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 115,106,451 | 115,106,451 | + | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 115,106,451 | 115,106,451 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 122,609,441 | 122,609,441 | + | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 122,609,441 | 122,609,441 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 79,711,780 | 79,711,780 | + | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 79,711,780 | 79,711,780 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 82,766,315 | 82,766,315 | + | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000008.10 | Chr8 | 82,766,315 | 82,766,315 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 14,343,474 | 14,343,474 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 14,343,475 | 14,343,475 | + | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 16,552,766 | 16,552,766 | - | ||
nsv7098701 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000012.11 | Chr12 | 16,552,767 | 16,552,767 | + |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv18792383 | intrachromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
nssv18792395 | intrachromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
nssv18792394 | interchromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
nssv18792397 | interchromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
nssv18792396 | intrachromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
nssv18792399 | intrachromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
nssv18792400 | intrachromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
nssv18792382 | intrachromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
nssv18792398 | interchromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
nssv18792381 | interchromosomal translocation | FHU14-134 | Sequencing | Sequence alignment | 10 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv18792383 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 78,799,545 | 78,799,545 | + |
nssv18792395 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 78,799,545 | 78,799,545 | - |
nssv18792394 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 81,854,080 | 81,854,080 | + |
nssv18792397 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 81,854,080 | 81,854,080 | - |
nssv18792396 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 113,327,375 | 113,327,375 | + |
nssv18792399 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 113,327,377 | 113,327,377 | - |
nssv18792400 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 113,518,619 | 113,518,619 | + |
nssv18792395 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 113,518,620 | 113,518,620 | - |
nssv18792396 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 113,788,286 | 113,788,286 | + |
nssv18792399 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 113,788,286 | 113,788,286 | - |
nssv18792382 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 113,914,806 | 113,914,806 | - |
nssv18792398 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 113,914,807 | 113,914,807 | + |
nssv18792383 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 114,094,222 | 114,094,222 | + |
nssv18792400 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 114,094,222 | 114,094,222 | - |
nssv18792381 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 121,597,201 | 121,597,201 | + |
nssv18792382 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 121,597,201 | 121,597,201 | - |
nssv18792398 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 14,301,475 | 14,301,475 | - |
nssv18792381 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 14,301,476 | 14,301,476 | + |
nssv18792394 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 16,399,832 | 16,399,832 | - |
nssv18792397 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 16,399,833 | 16,399,833 | + |
nssv18792383 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 79,711,780 | 79,711,780 | + | ||
nssv18792395 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 79,711,780 | 79,711,780 | - | ||
nssv18792394 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 82,766,315 | 82,766,315 | + | ||
nssv18792397 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 82,766,315 | 82,766,315 | - | ||
nssv18792396 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 114,339,604 | 114,339,604 | + | ||
nssv18792399 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 114,339,606 | 114,339,606 | - | ||
nssv18792400 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 114,530,848 | 114,530,848 | + | ||
nssv18792395 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 114,530,849 | 114,530,849 | - | ||
nssv18792396 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 114,800,515 | 114,800,515 | + | ||
nssv18792399 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 114,800,515 | 114,800,515 | - | ||
nssv18792382 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 114,927,035 | 114,927,035 | - | ||
nssv18792398 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 114,927,036 | 114,927,036 | + | ||
nssv18792383 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 115,106,451 | 115,106,451 | + | ||
nssv18792400 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 115,106,451 | 115,106,451 | - | ||
nssv18792381 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 122,609,441 | 122,609,441 | + | ||
nssv18792382 | Submitted genomic | GRCh37 (hg19) | NC_000008.10 | Chr8 | 122,609,441 | 122,609,441 | - | ||
nssv18792398 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 14,343,474 | 14,343,474 | - | ||
nssv18792381 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 14,343,475 | 14,343,475 | + | ||
nssv18792394 | Submitted genomic | GRCh37 (hg19) | NC_000012.11 | Chr12 | 16,552,766 | 16,552,766 | - | ||
nssv18792397 | Submitted genomic | GRCh37 (hg19) | NC_000012.11 | Chr12 | 16,552,767 | 16,552,767 | + |