nsv7098698
- Organism: Homo sapiens
- Study:nstd230 (Sugimoto et al. 2023)
- Variant Type:complex chromosomal rearrangement
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:11
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 109 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 102 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 95 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 95 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 116 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 116 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 78 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 78 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 23 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 102 SVs from 18 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 19 studies. See in: genome view
Overlapping variant regions from other studies: 95 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 95 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 105 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 106 SVs from 16 studies. See in: genome view
Overlapping variant regions from other studies: 116 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 116 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 78 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 78 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 20 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|---|
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,614,082 | 167,614,082 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,614,082 | 167,614,082 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,751,110 | 167,751,110 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,751,114 | 167,751,114 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,751,282 | 167,751,282 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,841,491 | 167,841,491 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,860,721 | 167,860,721 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,861,504 | 167,861,504 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,863,917 | 167,863,917 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 167,863,917 | 167,863,917 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 171,343,838 | 171,343,838 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 171,343,838 | 171,343,838 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 94,084,314 | 94,084,314 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 94,084,322 | 94,084,322 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 121,115,002 | 121,115,002 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 121,115,009 | 121,115,009 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 121,163,303 | 121,163,303 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 121,163,304 | 121,163,304 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 20,821,385 | 20,821,385 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 20,821,390 | 20,821,390 | - |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 20,857,144 | 20,857,144 | + |
nsv7098698 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 20,857,147 | 20,857,147 | - |
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,331,870 | 167,331,870 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,331,870 | 167,331,870 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,468,898 | 167,468,898 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,468,902 | 167,468,902 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,469,070 | 167,469,070 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,559,279 | 167,559,279 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,578,509 | 167,578,509 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,579,292 | 167,579,292 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,581,705 | 167,581,705 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 167,581,705 | 167,581,705 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 171,061,627 | 171,061,627 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 171,061,627 | 171,061,627 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 93,803,158 | 93,803,158 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 93,803,166 | 93,803,166 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 122,874,516 | 122,874,516 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 122,874,523 | 122,874,523 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 122,922,817 | 122,922,817 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000010.10 | Chr10 | 122,922,818 | 122,922,818 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 20,842,931 | 20,842,931 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 20,842,936 | 20,842,936 | - | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 20,878,690 | 20,878,690 | + | ||
nsv7098698 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000011.9 | Chr11 | 20,878,693 | 20,878,693 | - |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv18792485 | intrachromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792492 | intrachromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792488 | interchromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792493 | intrachromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792489 | interchromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792491 | intrachromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792494 | intrachromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792495 | interchromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792490 | interchromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792487 | intrachromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
nssv18792486 | interchromosomal translocation | FHU18-275 | Sequencing | Sequence alignment | 11 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
---|---|---|---|---|---|---|---|---|---|
nssv18792485 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 94,084,314 | 94,084,314 | + |
nssv18792492 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 94,084,322 | 94,084,322 | - |
nssv18792488 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,614,082 | 167,614,082 | - |
nssv18792493 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,614,082 | 167,614,082 | + |
nssv18792492 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,751,110 | 167,751,110 | - |
nssv18792489 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,751,114 | 167,751,114 | + |
nssv18792491 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,751,282 | 167,751,282 | + |
nssv18792494 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,841,491 | 167,841,491 | - |
nssv18792495 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,860,721 | 167,860,721 | + |
nssv18792491 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,861,504 | 167,861,504 | - |
nssv18792490 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,863,917 | 167,863,917 | + |
nssv18792494 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 167,863,917 | 167,863,917 | - |
nssv18792485 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 171,343,838 | 171,343,838 | - |
nssv18792493 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 171,343,838 | 171,343,838 | + |
nssv18792487 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 121,115,002 | 121,115,002 | - |
nssv18792486 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 121,115,009 | 121,115,009 | + |
nssv18792487 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 121,163,303 | 121,163,303 | - |
nssv18792488 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 121,163,304 | 121,163,304 | + |
nssv18792486 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 20,821,385 | 20,821,385 | + |
nssv18792490 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 20,821,390 | 20,821,390 | - |
nssv18792489 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 20,857,144 | 20,857,144 | + |
nssv18792495 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 20,857,147 | 20,857,147 | - |
nssv18792485 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 93,803,158 | 93,803,158 | + | ||
nssv18792492 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 93,803,166 | 93,803,166 | - | ||
nssv18792488 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,331,870 | 167,331,870 | - | ||
nssv18792493 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,331,870 | 167,331,870 | + | ||
nssv18792492 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,468,898 | 167,468,898 | - | ||
nssv18792489 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,468,902 | 167,468,902 | + | ||
nssv18792491 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,469,070 | 167,469,070 | + | ||
nssv18792494 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,559,279 | 167,559,279 | - | ||
nssv18792495 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,578,509 | 167,578,509 | + | ||
nssv18792491 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,579,292 | 167,579,292 | - | ||
nssv18792490 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,581,705 | 167,581,705 | + | ||
nssv18792494 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 167,581,705 | 167,581,705 | - | ||
nssv18792485 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 171,061,627 | 171,061,627 | - | ||
nssv18792493 | Submitted genomic | GRCh37 (hg19) | NC_000003.11 | Chr3 | 171,061,627 | 171,061,627 | + | ||
nssv18792487 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 122,874,516 | 122,874,516 | - | ||
nssv18792486 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 122,874,523 | 122,874,523 | + | ||
nssv18792487 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 122,922,817 | 122,922,817 | - | ||
nssv18792488 | Submitted genomic | GRCh37 (hg19) | NC_000010.10 | Chr10 | 122,922,818 | 122,922,818 | + | ||
nssv18792486 | Submitted genomic | GRCh37 (hg19) | NC_000011.9 | Chr11 | 20,842,931 | 20,842,931 | + | ||
nssv18792490 | Submitted genomic | GRCh37 (hg19) | NC_000011.9 | Chr11 | 20,842,936 | 20,842,936 | - | ||
nssv18792489 | Submitted genomic | GRCh37 (hg19) | NC_000011.9 | Chr11 | 20,878,690 | 20,878,690 | + | ||
nssv18792495 | Submitted genomic | GRCh37 (hg19) | NC_000011.9 | Chr11 | 20,878,693 | 20,878,693 | - |