nsv6635089
- Organism: Homo sapiens
- Study:nstd227 (Kikas et al. 2023)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:583,145
- Publication(s):Kikas et al. 2023
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1897 SVs from 88 studies. See in: genome view
Overlapping variant regions from other studies: 1897 SVs from 88 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv6635089 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 120,874,005 | 121,457,149 |
| nsv6635089 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 120,209,700 | 120,792,844 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv18328534 | deletion | SNP array | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv18328534 | Remapped | Perfect | NC_000005.10:g.(12 0874005_?)_(?_1214 57149)del | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 120,874,005 | 121,457,149 |
| nssv18328534 | Submitted genomic | NC_000005.9:g.(120 209700_?)_(?_12079 2844)del | GRCh37 (hg19) | NC_000005.9 | Chr5 | 120,209,700 | 120,792,844 |