Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6623465

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:3
Validation:Not tested
Clinical Assertions: No
Region Size:27,558

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 375 SVs from 60 studies. See in: genome view

Remapped(Score: Perfect):34,959,771-34,987,328

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6623465	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000016.10	Chr16	34,959,771	34,987,328
nsv6623465	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000016.9	Chr16	34,194,142	34,221,699

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18294542	deletion	OSC4465	SNP array	Probe signal intensity	15
nssv18322386	duplication	OSC1417	SNP array	Probe signal intensity	12
nssv18325233	deletion	OSC1858	SNP array	Probe signal intensity	8

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18294542	Remapped	Perfect	NC_000016.10:g.(?_ 34959771)_(3498732 8_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	34,959,771	34,987,328
nssv18322386	Remapped	Perfect	NC_000016.10:g.(?_ 34959771)_(3498732 8_?)dup	GRCh38.p12	First Pass	NC_000016.10	Chr16	34,959,771	34,987,328
nssv18325233	Remapped	Perfect	NC_000016.10:g.(?_ 34959771)_(3498732 8_?)del	GRCh38.p12	First Pass	NC_000016.10	Chr16	34,959,771	34,987,328
nssv18294542	Submitted genomic		NC_000016.9:g.(?_3 4194142)_(34221699 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	34,194,142	34,221,699
nssv18322386	Submitted genomic		NC_000016.9:g.(?_3 4194142)_(34221699 _?)dup	GRCh37 (hg19)		NC_000016.9	Chr16	34,194,142	34,221,699
nssv18325233	Submitted genomic		NC_000016.9:g.(?_3 4194142)_(34221699 _?)del	GRCh37 (hg19)		NC_000016.9	Chr16	34,194,142	34,221,699

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI