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dbVar

Database of genomic structural variation

nsv6622989

Organism: Homo sapiens

Study:nstd224 (Zarrei et al. 2023)
Variant Type:copy number variation
Method Type:SNP array
Submitted on:GRCh37

Variant Calls:4
Validation:Not tested
Clinical Assertions: No
Region Size:94,184

Publication(s):Zarrei et al. 2023

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 1821 SVs from 95 studies. See in: genome view

Remapped(Score: Perfect):24,201,830-24,296,013

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nsv6622989	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	24,201,830	24,296,013
nsv6622989	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	24,446,977	24,541,160

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv18283671	deletion	OSC2395	SNP array	Probe signal intensity	nssv18283043, nssv18283042
nssv18288932	duplication	OSC3302	SNP array	Probe signal intensity	5
nssv18300161	duplication	OSC5401	SNP array	Probe signal intensity	7
nssv18300712	duplication	OSC5626	SNP array	Probe signal intensity	nssv18300713

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
nssv18283671	Remapped	Perfect	NC_000015.10:g.(?_ 24201830)_(2429601 3_?)del	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,201,830	24,296,013
nssv18288932	Remapped	Perfect	NC_000015.10:g.(?_ 24201830)_(2429601 3_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,201,830	24,296,013
nssv18300161	Remapped	Perfect	NC_000015.10:g.(?_ 24201830)_(2429601 3_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,201,830	24,296,013
nssv18300712	Remapped	Perfect	NC_000015.10:g.(?_ 24201830)_(2429601 3_?)dup	GRCh38.p12	First Pass	NC_000015.10	Chr15	24,201,830	24,296,013
nssv18283671	Submitted genomic		NC_000015.9:g.(?_2 4446977)_(24541160 _?)del	GRCh37 (hg19)		NC_000015.9	Chr15	24,446,977	24,541,160
nssv18288932	Submitted genomic		NC_000015.9:g.(?_2 4446977)_(24541160 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	24,446,977	24,541,160
nssv18300161	Submitted genomic		NC_000015.9:g.(?_2 4446977)_(24541160 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	24,446,977	24,541,160
nssv18300712	Submitted genomic		NC_000015.9:g.(?_2 4446977)_(24541160 _?)dup	GRCh37 (hg19)		NC_000015.9	Chr15	24,446,977	24,541,160

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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