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dbVar

Database of genomic structural variation

nsv6308884

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element deletion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:8,271

Description:nsv6147402 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 133 SVs from 31 studies. See in: genome view

Remapped(Score: Perfect):160,690,948-160,699,218

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6308884	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	160,690,948	160,699,218
nsv6308884	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	160,660,738	160,669,008

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17674987	mobile element deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17674987	Remapped	Perfect	NC_000001.11:g.160 690948_160699218de l	GRCh38.p12	First Pass	NC_000001.11	Chr1	160,690,948	160,699,218
nssv17674987	Submitted genomic		NC_000001.10:g.160 660738_160669008de l	GRCh37 (hg19)		NC_000001.10	Chr1	160,660,738	160,669,008

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17674987	0.011	72	6378

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