Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6308863

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Description:nsv5555761 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 122 SVs from 17 studies. See in: genome view

Remapped(Score: Perfect):121,295,111-121,295,162

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6308863	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	121,295,111	121,295,162
nsv6308863	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	121,165,820	121,165,871

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17674818	sva insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17674818	Remapped	Perfect	NC_000011.10:g.121 295111_121295162in s?	GRCh38.p12	First Pass	NC_000011.10	Chr11	121,295,111	121,295,162
nssv17674818	Submitted genomic		NC_000011.9:g.1211 65820_121165871ins ?	GRCh37 (hg19)		NC_000011.9	Chr11	121,165,820	121,165,871

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17674818	0.719	4602	6402

You are here: NCBI