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dbVar

Database of genomic structural variation

nsv6308826

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Description:nsv5559535 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 133 SVs from 24 studies. See in: genome view

Remapped(Score: Perfect):87,798,705-87,798,756

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6308826	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	87,798,705	87,798,756
nsv6308826	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	88,719,857	88,719,908

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17664588	line1 insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17664588	Remapped	Perfect	NC_000004.12:g.877 98705_87798756ins?	GRCh38.p12	First Pass	NC_000004.12	Chr4	87,798,705	87,798,756
nssv17664588	Submitted genomic		NC_000004.11:g.887 19857_88719908ins?	GRCh37 (hg19)		NC_000004.11	Chr4	88,719,857	88,719,908

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17664588	0.033	213	6404

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