Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv6308275

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element deletion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:6,289

Description:nsv6147208 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 67 SVs from 29 studies. See in: genome view

Remapped(Score: Perfect):190,106,436-190,112,724

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6308275	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	190,106,436	190,112,724
nsv6308275	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	191,027,591	191,033,879

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17668335	mobile element deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17668335	Remapped	Perfect	NC_000004.12:g.190 106436_190112724de l	GRCh38.p12	First Pass	NC_000004.12	Chr4	190,106,436	190,112,724
nssv17668335	Submitted genomic		NC_000004.11:g.191 027591_191033879de l	GRCh37 (hg19)		NC_000004.11	Chr4	191,027,591	191,033,879

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17668335	0.186	1188	6404

You are here: NCBI