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dbVar

Database of genomic structural variation

nsv6298077

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:38,001

Description:nsv5470554 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 297 SVs from 48 studies. See in: genome view

Remapped(Score: Perfect):106,159,381-106,197,381

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv6298077	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	106,159,381	106,197,381
nsv6298077	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	107,080,538	107,118,538

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17664650	duplication	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17664650	Remapped	Perfect	NC_000004.12:g.106 159381_106197381du p	GRCh38.p12	First Pass	NC_000004.12	Chr4	106,159,381	106,197,381
nssv17664650	Submitted genomic		NC_000004.11:g.107 080538_107118538du p	GRCh37 (hg19)		NC_000004.11	Chr4	107,080,538	107,118,538

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17664650	0.082	505	6134

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