nsv6137533
- Organism: Homo sapiens
- Study:nstd213 (Pham et al. 2021)
- Variant Type:translocation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 108 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 12 studies. See in: genome view
Overlapping variant regions from other studies: 108 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 68 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|---|
| nsv6137533 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 127,791,425 | 127,791,425 | - |
| nsv6137533 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 163,573,446 | 163,573,446 | + |
| nsv6137533 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 127,127,117 | 127,127,117 | - | ||
| nsv6137533 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000005.9 | Chr5 | 163,000,452 | 163,000,452 | + |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17678171 | intrachromosomal translocation | SAMN20524662 | Sequencing | Paired-end mapping | 1,603 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop | strand |
|---|---|---|---|---|---|---|---|---|---|
| nssv17678171 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 127,791,425 | 127,791,425 | - |
| nssv17678171 | Remapped | Perfect | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 163,573,446 | 163,573,446 | + |
| nssv17678171 | Submitted genomic | GRCh37 (hg19) | NC_000005.9 | Chr5 | 127,127,117 | 127,127,117 | - | ||
| nssv17678171 | Submitted genomic | GRCh37 (hg19) | NC_000005.9 | Chr5 | 163,000,452 | 163,000,452 | + |