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dbVar

Database of genomic structural variation

nsv6135049

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:199,719

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 971 SVs from 85 studies. See in: genome view

Remapped(Score: Perfect):90,850,031-91,049,749

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6135049	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	90,850,031	90,850,045	91,049,735	91,049,749
nsv6135049	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	91,771,182	91,771,196	91,970,886	91,970,900

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17677750	deletion	SAMN20524657	Sequencing	Paired-end mapping	656

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17677750	Remapped	Perfect	NC_000004.12:g.(90 850031_90850045)_( 91049735_91049749) del	GRCh38.p12	First Pass	NC_000004.12	Chr4	90,850,031	90,850,045	91,049,735	91,049,749
nssv17677750	Submitted genomic		NC_000004.11:g.(91 771182_91771196)_( 91970886_91970900) del	GRCh37 (hg19)		NC_000004.11	Chr4	91,771,182	91,771,196	91,970,886	91,970,900

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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