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dbVar

Database of genomic structural variation

nsv6134719

Organism: Homo sapiens

Study:nstd213 (Pham et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:276,324

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 877 SVs from 79 studies. See in: genome view

Remapped(Score: Perfect):100,915,425-101,191,748

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nsv6134719	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000004.12	Chr4	100,915,425	100,915,430	101,191,735	101,191,748
nsv6134719	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000004.11	Chr4	101,836,582	101,836,587	102,112,892	102,112,905

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17677645	duplication	SAMN20524660	Sequencing	Paired-end mapping	208

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
nssv17677645	Remapped	Perfect	NC_000004.12:g.(10 0915425_100915430) _(101191735_101191 748)dup	GRCh38.p12	First Pass	NC_000004.12	Chr4	100,915,425	100,915,430	101,191,735	101,191,748
nssv17677645	Submitted genomic		NC_000004.11:g.(10 1836582_101836587) _(102112892_102112 905)dup	GRCh37 (hg19)		NC_000004.11	Chr4	101,836,582	101,836,587	102,112,892	102,112,905

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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