nsv6134563
- Organism: Homo sapiens
- Study:nstd213 (Pham et al. 2021)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:139,467
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 505 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 504 SVs from 63 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nsv6134563 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 61,033,675 | 61,033,675 | 61,173,141 | 61,173,141 |
| nsv6134563 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 61,019,347 | 61,019,350 | 61,158,811 | 61,158,814 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17682344 | deletion | SAMN20524660 | Sequencing | Paired-end mapping | 208 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| nssv17682344 | Remapped | Good | NC_000003.12:g.(61 033675_61033675)_( 61173141_61173141) del | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 61,033,675 | 61,033,675 | 61,173,141 | 61,173,141 |
| nssv17682344 | Submitted genomic | NC_000003.11:g.(61 019347_61019350)_( 61158811_61158814) del | GRCh37 (hg19) | NC_000003.11 | Chr3 | 61,019,347 | 61,019,350 | 61,158,811 | 61,158,814 |