nsv6117217
- Organism: Homo sapiens
- Study:nstd186 (NCBI Curated Common Structural Variants)
- Variant Type:mobile element insertion
- Method Type:Curated
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:53
- Description:nsv5560614 from Byrska-Bishop et. al 2021. For a full list of variants now included in nstd186, refer to the mapping file provided here.
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 306 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 307 SVs from 27 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv6117217 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 18,260,594 | 18,260,646 |
nsv6117217 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000023.10 | ChrX | 18,278,714 | 18,278,766 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17960778 | alu insertion | Curated | Curated |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17960778 | Remapped | Perfect | NC_000023.11:g.182 60594_18260646ins? | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 18,260,594 | 18,260,646 |
nssv17960778 | Submitted genomic | NC_000023.10:g.182 78714_18278766ins? | GRCh37 (hg19) | NC_000023.10 | ChrX | 18,278,714 | 18,278,766 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv17960778 | 0.023 | 150 | 6404 |