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dbVar

Database of genomic structural variation

nsv5998180

Organism: Homo sapiens

Study:nstd212 (Wu et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:189,390

Publication(s):Wu et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 645 SVs from 62 studies. See in: genome view

Submitted genomic80,576,504-80,765,893

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5998180	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	80,576,504	80,765,893
nsv5998180	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	81,497,658	81,687,047

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17543588	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17543588	Submitted genomic		NC_000004.12:g.805 76504_80765893del	GRCh38 (hg38)		NC_000004.12	Chr4	80,576,504	80,765,893
nssv17543588	Remapped	Perfect	NC_000004.11:g.814 97658_81687047del	GRCh37.p13	First Pass	NC_000004.11	Chr4	81,497,658	81,687,047

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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