Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5980357

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 249 SVs from 41 studies. See in: genome view

Submitted genomic20,264,644-20,264,644

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5980357	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000019.10	Chr19	20,264,644	20,264,644
nsv5980357	Remapped	Perfect	GRCh37.p13	Primary Assembly	Second Pass	NC_000019.9	Chr19	20,375,453	20,375,453
nsv5980357	Remapped	Perfect	GRCh37.p13	PATCHES	First Pass	NW_003571053.2	Chr19\|NW_0 03571053.2	181,897	181,897

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17407256	insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17407256	Submitted genomic		NC_000019.10:g.202 64644_20264645ins1 11	GRCh38 (hg38)		NC_000019.10	Chr19	20,264,644	20,264,644
nssv17407256	Remapped	Perfect	NW_003571053.2:g.1 81897_181898ins111	GRCh37.p13	First Pass	NW_003571053.2	Chr19\|NW_0 03571053.2	181,897	181,897
nssv17407256	Remapped	Perfect	NC_000019.9:g.2037 5453_20375454ins11 1	GRCh37.p13	Second Pass	NC_000019.9	Chr19	20,375,453	20,375,453

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI