nsv572108
- Organism: Homo sapiens
- Study:nstd54 (Cooper et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:62,418
- Publication(s):Cooper et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2549 SVs from 88 studies. See in: genome view
Overlapping variant regions from other studies: 2549 SVs from 88 studies. See in: genome view
Overlapping variant regions from other studies: 1684 SVs from 27 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv572108 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 32,548,812 | 32,611,229 |
| nsv572108 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 32,560,133 | 32,622,550 |
| nsv572108 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000016.8 | Chr16 | 32,467,634 | 32,530,051 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv855869 | copy number loss | SNP array | SNP genotyping analysis |
| nssv855870 | copy number gain | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv855869 | Remapped | Perfect | NC_000016.10:g.(?_ 32548812)_(3261122 9_?)del | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 32,548,812 | 32,611,229 |
| nssv855870 | Remapped | Perfect | NC_000016.10:g.(?_ 32548812)_(3261122 9_?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 32,548,812 | 32,611,229 |
| nssv855869 | Remapped | Perfect | NC_000016.9:g.(?_3 2560133)_(32622550 _?)del | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 32,560,133 | 32,622,550 |
| nssv855870 | Remapped | Perfect | NC_000016.9:g.(?_3 2560133)_(32622550 _?)dup | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 32,560,133 | 32,622,550 |
| nssv855869 | Submitted genomic | NC_000016.8:g.(?_3 2467634)_(32530051 _?)del | NCBI36 (hg18) | NC_000016.8 | Chr16 | 32,467,634 | 32,530,051 | ||
| nssv855870 | Submitted genomic | NC_000016.8:g.(?_3 2467634)_(32530051 _?)dup | NCBI36 (hg18) | NC_000016.8 | Chr16 | 32,467,634 | 32,530,051 |