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dbVar

Database of genomic structural variation

nsv5665020

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:inversion
Method Type:Optical mapping, Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:32,936

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 496 SVs from 80 studies. See in: genome view

Submitted genomic55,798,353-55,831,288

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5665020	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000016.10	Chr16	55,798,353	55,831,288
nsv5665020	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000016.9	Chr16	55,832,265	55,865,200

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17098592	inversion	SAMN00006580	Optical mapping, Sequencing	Optical mapping, Sequence alignment	9,409

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17098592	Submitted genomic		NC_000016.10:g.557 98353_55831288inv	GRCh38 (hg38)		NC_000016.10	Chr16	55,798,353	55,831,288
nssv17098592	Remapped	Perfect	NC_000016.9:g.5583 2265_55865200inv	GRCh37.p13	First Pass	NC_000016.9	Chr16	55,832,265	55,865,200

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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