nsv513690
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:7,113
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 236 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 236 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 88 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv513690 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 25,054,080 | 25,061,192 |
| nsv513690 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 25,075,626 | 25,082,738 |
| nsv513690 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 25,032,202 | 25,039,314 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv626942 | inversion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv626942 | Remapped | Perfect | NC_000011.10:g.(25 054080_?)_(?_25061 192)inv7113 | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 25,054,080 | 25,061,192 |
| nssv626942 | Remapped | Perfect | NC_000011.9:g.(250 75626_?)_(?_250827 38)inv7113 | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 25,075,626 | 25,082,738 |
| nssv626942 | Submitted genomic | NC_000011.8:g.(250 32202_?)_(?_250393 14)inv7113 | NCBI36 (hg18) | NC_000011.8 | Chr11 | 25,032,202 | 25,039,314 |