nsv512819
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,586
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 162 SVs from 33 studies. See in: genome view
Overlapping variant regions from other studies: 162 SVs from 33 studies. See in: genome view
Overlapping variant regions from other studies: 51 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv512819 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 183,171,804 | 183,173,389 |
| nsv512819 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 182,889,592 | 182,891,177 |
| nsv512819 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000003.10 | Chr3 | 184,372,286 | 184,373,871 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv625455 | insertion | 1 | Sequencing | Paired-end mapping | 2,637 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv625455 | Remapped | Perfect | NC_000003.12:g.(18 3171804_?)_(?_1831 73389)ins853 | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 183,171,804 | 183,173,389 |
| nssv625455 | Remapped | Perfect | NC_000003.11:g.(18 2889592_?)_(?_1828 91177)ins853 | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 182,889,592 | 182,891,177 |
| nssv625455 | Submitted genomic | NC_000003.10:g.(18 4372286_?)_(?_1843 73871)ins853 | NCBI36 (hg18) | NC_000003.10 | Chr3 | 184,372,286 | 184,373,871 |