nsv511663
- Organism: Homo sapiens
- Study:nstd50 (Arlt et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:22,174
- Publication(s):Arlt et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 610 SVs from 55 studies. See in: genome view
Overlapping variant regions from other studies: 599 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 273 SVs from 14 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nsv511663 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 155,687,184 | 155,688,696 | 155,691,896 | 155,709,357 |
nsv511663 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 154,916,845 | 154,918,357 | 154,921,557 | 154,939,018 |
nsv511663 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 154,570,039 | 154,571,551 | 154,574,751 | 154,592,212 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
nssv626300 | copy number gain | 1 | SNP array | SNP genotyping analysis | 2,637 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
nssv626300 | Remapped | Perfect | NC_000023.11:g.(15 5687184_155688696) _(155691896_155709 357)dup | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 155,687,184 | 155,688,696 | 155,691,896 | 155,709,357 |
nssv626300 | Remapped | Perfect | NC_000023.10:g.(15 4916845_154918357) _(154921557_154939 018)dup | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 154,916,845 | 154,918,357 | 154,921,557 | 154,939,018 |
nssv626300 | Submitted genomic | NC_000023.9:g.(154 570039_154571551)_ (154574751_1545922 12)dup | NCBI36 (hg18) | NC_000023.9 | ChrX | 154,570,039 | 154,571,551 | 154,574,751 | 154,592,212 |