nsv499669
- Organism: Homo sapiens
- Study:nstd47 (Kidd et al. 2010b)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:14,057
- Publication(s):Kidd et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 450 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 447 SVs from 36 studies. See in: genome view
Overlapping variant regions from other studies: 34 SVs from 15 studies. See in: genome view
Overlapping variant regions from other studies: 199 SVs from 9 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv499669 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 101,597,543 | 101,611,599 |
| nsv499669 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 100,852,521 | 100,866,579 |
| nsv499669 | Remapped | Good | GRCh37.p13 | PATCHES | Second Pass | NW_004070883.1 | ChrX|NW_00 4070883.1 | 279,218 | 293,274 |
| nsv499669 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 100,739,177 | 100,753,235 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv585585 | inversion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv585585 | Remapped | Good | NC_000023.11:g.101 597543_101611599in v | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 101,597,543 | 101,611,599 |
| nssv585585 | Remapped | Good | NW_004070883.1:g.2 79218_293274inv | GRCh37.p13 | Second Pass | NW_004070883.1 | ChrX|NW_00 4070883.1 | 279,218 | 293,274 |
| nssv585585 | Remapped | Perfect | NC_000023.10:g.100 852521_100866579in v | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 100,852,521 | 100,866,579 |
| nssv585585 | Submitted genomic | NC_000023.9:g.1007 39177_100753235inv | NCBI36 (hg18) | NC_000023.9 | ChrX | 100,739,177 | 100,753,235 |