nsv499499
- Organism: Homo sapiens
- Study:nstd47 (Kidd et al. 2010b)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:19,512
- Publication(s):Kidd et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 454 SVs from 37 studies. See in: genome view
Overlapping variant regions from other studies: 459 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 20 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 200 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv499499 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 46,951,601 | 46,971,112 |
| nsv499499 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 46,810,834 | 46,830,701 |
| nsv499499 | Remapped | Good | GRCh37.p13 | PATCHES | Second Pass | NW_004166866.1 | ChrX|NW_00 4166866.1 | 201,162 | 220,673 |
| nsv499499 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 46,695,778 | 46,715,645 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv585578 | inversion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv585578 | Remapped | Good | NC_000023.11:g.469 51601_46971112inv | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 46,951,601 | 46,971,112 |
| nssv585578 | Remapped | Good | NW_004166866.1:g.2 01162_220673inv | GRCh37.p13 | Second Pass | NW_004166866.1 | ChrX|NW_00 4166866.1 | 201,162 | 220,673 |
| nssv585578 | Remapped | Perfect | NC_000023.10:g.468 10834_46830701inv | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 46,810,834 | 46,830,701 |
| nssv585578 | Submitted genomic | NC_000023.9:g.4669 5778_46715645inv | NCBI36 (hg18) | NC_000023.9 | ChrX | 46,695,778 | 46,715,645 |