nsv469672
- Organism: Homo sapiens
- Study:nstd29 (Locke et al. 2006)
- Variant Type:copy number variation
- Method Type:BAC aCGH
- Submitted on:NCBI34 (hg16)
- Variant Calls:11
- Validation:Not tested
- Clinical Assertions: No
- Region Size:140,785
- Publication(s):Locke et al. 2006
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1073 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 1102 SVs from 83 studies. See in: genome view
Overlapping variant regions from other studies: 3 SVs from 1 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv469672 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nsv469672 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nsv469672 | Submitted genomic | NCBI34 (hg16) | Primary Assembly | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv1672688 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1673088 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1673207 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1673228 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1673392 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1674223 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1674877 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1675315 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1676071 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1676268 | copy number gain | BAC aCGH | Probe signal intensity |
| nssv1676320 | copy number gain | BAC aCGH | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv1672688 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1673088 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1673207 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1673228 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1673392 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1674223 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1674877 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1675315 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1676071 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1676268 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1676320 | Remapped | Perfect | NC_000005.10:g.(?_ 21458097)_(2159888 1_?)dup | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 21,458,097 | 21,598,881 |
| nssv1672688 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1673088 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1673207 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1673228 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1673392 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1674223 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1674877 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1675315 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1676071 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1676268 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1676320 | Remapped | Perfect | NC_000005.9:g.(?_2 1458206)_(21598990 _?)dup | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 21,458,206 | 21,598,990 |
| nssv1672688 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1673088 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1673207 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1673228 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1673392 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1674223 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1674877 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1675315 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1676071 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1676268 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 | ||
| nssv1676320 | Submitted genomic | NC_000005.7:g.(?_2 1503707)_(21644491 _?)dup | NCBI34 (hg16) | NC_000005.7 | Chr5 | 21,503,707 | 21,644,491 |