nsv4684419
- Organism: Homo sapiens
- Study:nstd192 (Smajlagić et al. 2020)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,586,983
- Publication(s):Smajlagic et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 6049 SVs from 127 studies. See in: genome view
Overlapping variant regions from other studies: 6049 SVs from 127 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4684419 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 30,635,158 | 32,222,140 |
| nsv4684419 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 30,927,361 | 32,514,341 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis |
|---|---|---|---|---|
| nssv16215359 | deletion | mb1:o19 | SNP array | SNP genotyping analysis |
| nssv16215360 | deletion | mb1:o20 | SNP array | SNP genotyping analysis |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16215359 | Remapped | Perfect | NC_000015.10:g.(?_ 30635158)_(3222214 0_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 30,635,158 | 32,222,140 |
| nssv16215360 | Remapped | Perfect | NC_000015.10:g.(?_ 30635158)_(3222214 0_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 30,635,158 | 32,222,140 |
| nssv16215359 | Submitted genomic | NC_000015.9:g.(?_3 0927361)_(32514341 _?)del | GRCh37 (hg19) | NC_000015.9 | Chr15 | 30,927,361 | 32,514,341 | ||
| nssv16215360 | Submitted genomic | NC_000015.9:g.(?_3 0927361)_(32514341 _?)del | GRCh37 (hg19) | NC_000015.9 | Chr15 | 30,927,361 | 32,514,341 |