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dbVar

Database of genomic structural variation

nsv4641019

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element deletion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:350

Description:esv3874981 from 1000 Genomes Consortium Phase 3 Integrated SV. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 160 SVs from 51 studies. See in: genome view

Remapped(Score: Perfect):45,775,767-45,776,116

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4641019	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000015.10	Chr15	45,775,767	45,776,116
nsv4641019	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000015.9	Chr15	46,067,965	46,068,314

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16192705	alu deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16192705	Remapped	Perfect	NC_000015.10:g.457 75767_45776116del	GRCh38.p12	First Pass	NC_000015.10	Chr15	45,775,767	45,776,116
nssv16192705	Submitted genomic		NC_000015.9:g.4606 7965_46068314del	GRCh37 (hg19)		NC_000015.9	Chr15	46,067,965	46,068,314

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16192705	0.612	3066	5008

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