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dbVar

Database of genomic structural variation

nsv4637005

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element deletion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:357

Description:esv3819549 from 1000 Genomes Consortium Phase 3 Integrated SV. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 173 SVs from 47 studies. See in: genome view

Remapped(Score: Perfect):69,561,643-69,561,999

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4637005	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000001.11	Chr1	69,561,643	69,561,999
nsv4637005	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000001.10	Chr1	70,027,326	70,027,682

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16181429	alu deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16181429	Remapped	Perfect	NC_000001.11:g.695 61643_69561999del	GRCh38.p12	First Pass	NC_000001.11	Chr1	69,561,643	69,561,999
nssv16181429	Submitted genomic		NC_000001.10:g.700 27326_70027682del	GRCh37 (hg19)		NC_000001.10	Chr1	70,027,326	70,027,682

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16181429	0.46	2302	5008

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