nsv460741
- Organism: Homo sapiens
- Study:nstd27 (Itsara et al. 2009)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI35 (hg17)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:240,985
- Publication(s):Itsara et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 749 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 749 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 24 SVs from 6 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv460741 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 83,577,546 | 83,818,530 |
| nsv460741 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000003.11 | Chr3 | 83,626,697 | 83,867,681 |
| nsv460741 | Submitted genomic | NCBI35 (hg17) | Primary Assembly | NC_000003.9 | Chr3 | 83,709,387 | 83,950,371 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv638107 | copy number gain | SNP array | SNP genotyping analysis | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv638107 | Remapped | Perfect | NC_000003.12:g.(?_ 83577546)_(8381853 0_?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 83,577,546 | 83,818,530 |
| nssv638107 | Remapped | Perfect | NC_000003.11:g.(?_ 83626697)_(8386768 1_?)dup | GRCh37.p13 | First Pass | NC_000003.11 | Chr3 | 83,626,697 | 83,867,681 |
| nssv638107 | Submitted genomic | NC_000003.9:g.(?_8 3709387)_(83950371 _?)dup | NCBI35 (hg17) | NC_000003.9 | Chr3 | 83,709,387 | 83,950,371 |