nsv4578677
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37, GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1,348
- Description:GRCh38/hg38 1p36.11(chr1:26519016-26520363)x0 AND Ductal breast carcinoma
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 90 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 298 SVs from 42 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Assembly | Assembly Unit | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|
| nsv4578677 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 26,519,016 | 26,520,363 |
| nsv4578677 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 26,801,111 | 26,856,444 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv8639706 | copy number loss | Multiple | Multiple | Ductal breast carcinoma | Uncertain significance | ClinVar | RCV000207160.3, VCV000221375.3 | 0 |
Variant Call Placement Information
| Variant Call ID | Placement Type | HGVS | Assembly | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|
| nssv8639706 | Submitted genomic | NC_000001.11:g.265 19016_26520363del | GRCh38 (hg38) | NC_000001.11 | Chr1 | 26,519,016 | 26,520,363 |
| nssv8639706 | Submitted genomic | NC_000001.10:g.268 01111_26856444del | GRCh37 (hg19) | NC_000001.10 | Chr1 | 26,801,111 | 26,856,444 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv8639706 | GRCh37: NC_000001.10:g.26801111_26856444del, GRCh38: NC_000001.11:g.26519016_26520363del | copy number loss | somatic | Ductal breast carcinoma | Uncertain significance | ClinVar | RCV000207160.3, VCV000221375.3 | 0 |