nsv436664
- Organism: Homo sapiens
- Study:nstd16 (Korbel et al. 2007)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:7,140
- Publication(s):Korbel et al. 2007
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 243 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 243 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 92 SVs from 10 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv436664 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000013.11 | Chr13 | 48,198,032 | 48,205,171 |
| nsv436664 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000013.10 | Chr13 | 48,772,168 | 48,779,307 |
| nsv436664 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000013.9 | Chr13 | 47,670,169 | 47,677,308 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv466737 | inversion | SAMN00001583 | Sequencing | Paired-end mapping | 822 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv466737 | Remapped | Perfect | NC_000013.11:g.(48 198032_?)_(?_48205 171)inv | GRCh38.p12 | First Pass | NC_000013.11 | Chr13 | 48,198,032 | 48,205,171 |
| nssv466737 | Remapped | Perfect | NC_000013.10:g.(48 772168_?)_(?_48779 307)inv | GRCh37.p13 | First Pass | NC_000013.10 | Chr13 | 48,772,168 | 48,779,307 |
| nssv466737 | Submitted genomic | NC_000013.9:g.(476 70169_?)_(?_476773 08)inv | NCBI36 (hg18) | NC_000013.9 | Chr13 | 47,670,169 | 47,677,308 |